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| 2 | |
| 3 | @@ -116,25 +116,28 @@
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| 4 |
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| 5 | target_link_libraries(ngs m pthread gc ffi dl json-c pcre)
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| 6 |
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| 7 | -add_custom_target(man ALL WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc COMMAND make man DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/doc/*.1.md)
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| 8 | +# XXX-Patched: pandoc is available for x86_64 only
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| 9 | +#add_custom_target(man ALL WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc COMMAND make man DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/doc/*.1.md)
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| 10 |
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| 11 |
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| 12 | install(FILES "${PROJECT_BINARY_DIR}/ngs" DESTINATION bin)
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| 13 | install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/ngs DESTINATION bin)
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| 14 | install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/lib/ DESTINATION lib/ngs)
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| 15 | -install(
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| 16 | - DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/bin/
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| 17 | - DESTINATION bin FILES_MATCHING PATTERN "*.ngs"
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| 18 | - PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_WRITE GROUP_EXECUTE WORLD_READ WORLD_WRITE WORLD_EXECUTE
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| 19 | -)
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| 20 | -install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/LICENSE DESTINATION doc/ngs)
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| 21 | +# XXX-Patched: these scripts are quite doubtful, looks like helper scripts for the project or experimental stuff
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| 22 | +#install(
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| 23 | +# DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/bin/
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| 24 | +# DESTINATION bin FILES_MATCHING PATTERN "*.ngs"
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| 25 | +# PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_WRITE GROUP_EXECUTE WORLD_READ WORLD_WRITE WORLD_EXECUTE
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| 26 | +#)
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| 27 | +#install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/LICENSE DESTINATION doc/ngs)
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| 28 |
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| 29 | if(APPLE)
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| 30 | set(MAN_DIR share/man/man1)
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| 31 | else()
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| 32 | set(MAN_DIR man/man1)
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| 33 | endif()
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| 34 | -install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc/ DESTINATION ${MAN_DIR} FILES_MATCHING PATTERN "*.1")
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| 35 | +# XXX-Patched: pandoc is available for x86_64 only
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| 36 | +#install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc/ DESTINATION ${MAN_DIR} FILES_MATCHING PATTERN "*.1")
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| 37 |
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| 38 | enable_testing()
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| 39 | add_test(all bash -c "${CMAKE_CURRENT_BINARY_DIR}/ngs ${CMAKE_CURRENT_SOURCE_DIR}/test.ngs")
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